Marker List

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Name Expression Phenotypes Ref. Available Picture
larval stage juvenile stage adult stage sperm juvenile adult
Tg[MiCiTnIG]2 muscle muscle, heart muscle, heart Joly JS et al., Culture of Ciona intestinalis in closed systems., Dev Dyn. 2007 Jul;236(7):1832-40. Sasakura Y et al (2010) Mol. Genet. Genomics 283(1),99-110 Sasakura Y et al (2012) Development 139(12),2156-60 Kawai N et al (2012) Dev. Growth Differ. 54(5),535-45 Yoshida et al (2017) Dev Biol 423, 111-125
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Tg[MiCiEpiIG]3 epidermis epidermis Joly JS et al., Culture of Ciona intestinalis in closed systems., Dev Dyn. 2007 Jul;236(7):1832-40. Sasakura Y et al (2010) Mol. Genet. Genomics 283(1),99-110 Sasakura Y et al (2012) Development 139(12),2156-60
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Tg[MiCiEpiIG]4 epidermis epidermis Joly JS et al., Culture of Ciona intestinalis in closed systems., Dev Dyn. 2007 Jul;236(7):1832-40. Sasakura Y et al (2010) Mol. Genet. Genomics 283(1),99-110 Sasakura Y et al (2012) Development 139(12),2156-60
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Tg[MiCiCesAG]1 epidermis epidermis epidermis Sasakura Y et al (2010) Mol. Genet. Genomics 283(1),99-110
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Tg[MiCiBraG]1 notochord no expression Joly JS et al., Culture of Ciona intestinalis in closed systems., Dev Dyn. 2007 Jul;236(7):1832-40. Sasakura Y et al (2010) Mol. Genet. Genomics 283(1),99-110 The living animals of this transgenic line is currently unavailable. Please contact Yasunori Sasakura (), if you wish to use the line for your experiment.
Tg[MiCiBraG]2 notochord no expression Joly JS et al., Culture of Ciona intestinalis in closed systems., Dev Dyn. 2007 Jul;236(7):1832-40. Sasakura Y et al (2010) Mol. Genet. Genomics 283(1),99-110
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Tg[MiCiNutG]3 neural tissue neural tissue neural tissue Joly JS et al., Culture of Ciona intestinalis in closed systems., Dev Dyn. 2007 Jul;236(7):1832-40. Sasakura Y et al (2010) Mol. Genet. Genomics 283(1),99-110 Iitsuka T et al (2014) Sci Rep 4(),5050 Yoshida et al (2017) Dev Biol 423, 111-125 Satoh T et al (2018) Sci Rep 8(1),5869
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Tg[MiCiNutG]4 neural tissue neural tissue neural tissue Joly JS et al., Culture of Ciona intestinalis in closed systems., Dev Dyn. 2007 Jul;236(7):1832-40. Sasakura Y et al (2010) Mol. Genet. Genomics 283(1),99-110 Iitsuka T et al (2014) Sci Rep 4(),5050 Satoh T et al (2018) Sci Rep 8(1),5869 The living animals of this transgenic line is currently unavailable. Please contact Yasunori Sasakura (), if you wish to use the line for your experiment.
Tg[MiCiTnIGCiprmG]2 muscle muscle, heart muscle, heart, testis, sperm Sasakura Y et al., Enhancer detection in the ascidian Ciona intestinalis with transposase-expressing lines of Minos., Dev Dyn. 2008 Jan;237(1):39-50. Sasakura Y et al (2010) Mol. Genet. Genomics 283(1),99-110 Sasakura Y et al (2012) Development 139(12),2156-60
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Tg[MiCiTnIGCiprmG]3 muscle muscle, heart muscle, heart, testis, sperm Sasakura Y et al., Enhancer detection in the ascidian Ciona intestinalis with transposase-expressing lines of Minos., Dev Dyn. 2008 Jan;237(1):39-50.
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Tg[MiCiTrlG]1 no expression ubiquitous ubiquitous Sasakura Y et al (2010) Mol. Genet. Genomics 283(1),99-110
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Tg[MiCiEF1aG]1 ubiquitous ubiquitous ubiquitous Sasakura Y et al (2010) Mol. Genet. Genomics 283(1),99-110
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Tg[MiCiVHG]1 no expression stomach no expression The living animals of this transgenic line is currently unavailable. Please contact Yasunori Sasakura (), if you wish to use the line for your experiment.
Tg[MiCiAKRK]1 mesenchyme blood cells, tunic cells, stomach, intestine Hozumi A et al (2010) Dev. Dyn. 239(4),1076-88 Sasakura Y et al (2018) Wiley Interdiscip Rev Dev Biol 7(2), Nozomu M Totsuka et al (2023) Dev Dyn. Nov;252(11):1363-1374. doi: 10.1002/dvdy.636. Epub 2023 Jun 21.
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Tg[MiCiVACHTK]5 acetylcholine neuron acetylcholine neuron acetylcholine neuron Horie T et al (2011) Nature 469(7331),525-8 Hozumi et al (2015) Dev. Dyn. 244, 1375-1393 Sasakura Y et al (2018) Wiley Interdiscip Rev Dev Biol 7(2),
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Tg[MiCiβ2TBK]2 pan neuron pan neuron,muscle, endostyle, peripharyngeal band, stigmata, intestine pan neuron,muscle, endostyle, peripharyngeal band, stigmata, intestine Horie T et al (2011) Nature 469(7331),525-8 Hozumi et al (2015) Dev. Dyn. 244, 1375-1393
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Tg[MiCiTHK]2 dopamine neuron Horie T et al (2018) Genes Dev. 32(19-20),1297-1302 Satake H et al (2023) Mol Cell Endocrinol. Mar 1:582:112122. doi: 10.1016/j.mce.2023.112122. Epub 2023 Dec 16.
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Tg[MiCiVGATK]1 GABA and glycine neuron GABA or glycine neuron GABA or glycine neuron Horie T et al (2011) Nature 469(7331),525-8 Hozumi et al (2015) Dev. Dyn. 244, 1375-1393
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Tg[MiCiVGATK]2 GABA and glycine neuron GABA or glycine neuron GABA or glycine neuron Horie T et al (2011) Nature 469(7331),525-8 Hozumi et al (2015) Dev. Dyn. 244, 1375-1393
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Tg[MiCiPC2K]2 peptide neuron peptide neuron peptide neuron Yokoyama et al (2014) Dev Dyn 243, 1362-1373 Osugi T et al (2017) PLoS ONE 12(6),e0180227 Osugi T et al (2020) Sci Rep 10(1),1892 Chacha PP et al (2022) Proc Natl Acad Sci U S A 119(4), Sakamoto A et al (2022) Dev Growth Differ 64(7),395-408
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Tg[MiCiTnIG]3 muscle muscle, heart muscle, heart Hozumi A et al (2010) Dev. Dyn. 239(4),1076-88 Yoshida et al (2017) Dev Biol 423, 111-125 Sasakura Y et al (2018) Wiley Interdiscip Rev Dev Biol 7(2),
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Tg[MiCiPC2K]3 peptide neuron peptide neuron peptide neuron Yokoyama et al (2014) Dev Dyn 243, 1362-1373 Osugi T et al (2017) PLoS ONE 12(6),e0180227 Sasakura Y et al (2018) Wiley Interdiscip Rev Dev Biol 7(2), Osugi T et al (2020) Sci Rep 10(1),1892 Chacha PP et al (2022) Proc Natl Acad Sci U S A 119(4), Sakamoto A et al (2022) Dev Growth Differ 64(7),395-408
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Tg[MiCiZipCiFkhK]1 endodermal strand intestine intestine Nakazawa K et al (2013) Dev. Dyn. 242(10),1172-83 Kawai et al (2015) Developmental Biology 403, 43-56 Sasakura Y et al (2018) Wiley Interdiscip Rev Dev Biol 7(2),
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Tg[MiCiVGLUTK]5 glutamate neuron glutamate neuron glutamate neuron, muscle Hozumi et al (2015) Dev. Dyn. 244, 1375-1393 The living animals of this transgenic line is currently unavailable. Please contact Yasunori Sasakura (), if you wish to use the line for your experiment.
Tg[MiCiVGLUTK]6 glutamate neuron glutamate neuron glutamate neuron, muscle Hozumi et al (2015) Dev. Dyn. 244, 1375-1393 The living animals of this transgenic line is currently unavailable. Please contact Yasunori Sasakura (), if you wish to use the line for your experiment.
Tg[MiCib2TBC]3 pan neuron pan neuron,muscle, endostyle, peripharyngeal band, stigmata, intestine pan neuron,muscle, endostyle, peripharyngeal band, stigmata, intestine Hozumi et al (2015) Dev. Dyn. 244, 1375-1393
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Tg[MiCiVACHTC]2 cholinergic neuron cholinergic neuron cholinergic neuron Satake H et al (2023) Mol Cell Endocrinol. Mar 1:582:112122. doi: 10.1016/j.mce.2023.112122. Epub 2023 Dec 16.
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Tg[MiCib2TBC]4 pan neuron,muscle, endostyle, peripharyngeal band, stigmata, intestine pan neuron,muscle, endostyle, peripharyngeal band, stigmata, intestine Hozumi et al (2015) Dev. Dyn. 244, 1375-1393
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Tg[MiCiNutK]4 neural tissue neural tissue neural tissue
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Tg[MiCiNutK]8 neural tissue neural tissue neural tissue
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Tg[MiCiCRALBPK]1 neural tissue neural tissue
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Tg[MiCiVGLUT4.3K]2 glutamate neuron glutamate neuron Sasakura Y et al (2018) Wiley Interdiscip Rev Dev Biol 7(2), Satake H et al (2023) Mol Cell Endocrinol. Mar 1:582:112122. doi: 10.1016/j.mce.2023.112122. Epub 2023 Dec 16.
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Tg[MiCiPC2mChe]1 neurons Neurons
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Tg[MiCiHox12K]1 nerve cord, endoderm Intestine Sasakura Y et al (2018) Wiley Interdiscip Rev Dev Biol 7(2),
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Tg[MiCiHox13K]1 digestive tube, epidermis digestive tube, epidermis, orange pigmented organ, neurons, sperm duct epithelium Tajima Y et al (2020) Dev. Biol. 458(1),120-131
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Tg[MiCiHox13K]2 digestive tube, epidermis digestive tube, epidermis, orange pigmented organ, neurons, sperm duct epithelium Tajima Y et al (2020) Dev. Biol. 458(1),120-131
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Tg[MiCignrh2K]1 CNS CNS, PNS at the edge of siphons
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Tg[MiCignrh2K]2 CNS CNS, PNS at the edge of siphons
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Tg[MiCiVPV]1 CNS, PNS at the edge of siphons, Digestive tube CNS Kawada T et al (2021) Front Endocrinol (Lausanne) 12(),668564
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Tg[MiCignrh1K]2 CNS CNS, PNS CNS, PNS Satake H et al (2023) Mol Cell Endocrinol. Mar 1:582:112122. doi: 10.1016/j.mce.2023.112122. Epub 2023 Dec 16.
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Tg[MiCignrh1K]3 CNS CNS, PNS CNS, PNS
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Tg[MiCiPC2mChe]3 neurons Neurons Neurons
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